Looks like part of your problem is that you named your server's source folder "projecteqemu" instead of "source" like the guide said, but you still created links to the non-existent source folder. You need to remove those links and remake new ones pointing to the correct path.
The ucs link below is pointing to the right place, but the world is not. I am not exactly sure how you even started the server at all unless you also made a folder named source and put the EQEmuServer code in there.
lrwxrwxrwx 1 root root 35 2010-06-21 18:50 ucs -> ../projecteqemu/EQEmuServer/ucs/ucs
lrwxrwxrwx 1 root root 18 2010-06-12 11:12 world -> source/world/world
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