Not sure why the list is iterating backwards..it's checking for things before they have been installed...
you can do a manual install..
https://github.com/EQEmu/Server/blob...e_manifest.txt
Just install those sqls from 9000 to 9008..then run the updater to ensure that the other changes are made.
EDIT: ACTUALLY... Did you hit 4 again to apply the updates? (Needs to be hit twice..first for queuing and second for application)