Honestly, I really don't see much wrong with your log files... No errors, Server loaded, Zones loaded. That tells me that zone.exe doesn't like what you did to CT. A few things I would try.
Back up your Database. Try doing a restore to that particular table(s). If that works, then obviously somewhere along the line, your changes started the issue. However if that does not work, try setting up a static zone for CT. Here's a link to the method for this -
http://www.eqemulator.net/forums/sho...38&postcount=2.
Let me know if you end up trying this, maybe we'll see something different in logs as well.