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 I can actually help you with this..I had the same problem but if you put REM before the exit and cls command when you Edit the Boot5Zones File, it works fine for me...Just minimize and it will go to sleep. Make it look like this
 REM: ****Read this first!!!****
 
 REM: This file requires your real IP in the place of "YourIP" when you are connecting
 REM: To the EQEmu Loginserver.
 
 REM: When you are using minilogin, Replace all IP Addresses to say 127.0.0.1
 
 REM: If you still get errors try using localhost instead of 127.0.0.1
 
 REM:--------------Start-----------------------
 
 
 @echo off
 start zone . "YourIP" 7995 "YourIP"
 start zone . "YourIP" 7996 "YourIP"
 start zone . "YourIP" 7997 "YourIP"
 start zone . "YourIP" 7998 "YourIP"
 start zone . "YourIP" 7999 "YourIP"
 REM exit
 REM cls
 
 
 REM:---------------END------------------------
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