That version works with 0.6.1 DR1, or it should rather. I'm using 4.0.21 myself but they are close enough. Since my binaries can connect to the db fine, it's probably pretty safe to rule out the code at being at fault so the problem is configuration... Double check db.ini and make sure the db is correct and also that the user and host both have access to the db named. Try setting the username as root in the ini. If it connects, then you know you have an authorization problem. I know you said you updated the db but just make sure you run through all the updates. If I remember correctly, it was a pair of .sql files, some single queries, and a couple of perl scripts.
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